Tuesday, 28 April 2015

Smooth the Patchy Hedgehog




Do you know what is common between the 2 pictures shown above? They are both called ‘Sonic Hedgehog’! That’s true – in biochemistry, there is a signaling pathway known as the ‘Hedgehog Pathway’, and the proteins involved have funny names like ‘Sonic hedgehog’, ‘Smoothened’ and ‘Patched’. The April issue of Nature Chemical Biology has a really great perspective article on this pathway and the drug development involving this cell signaling circuit. [1] Indeed, Smoothened is an oncoprotein , which is coded by an oncogene. Oncogenes are obviously important because they are the ones which are overexpressed in pathological situations and ultimately lead to many type of cancer. The Hedgehog pathway is an very important signaling pathway, as it is actively involved in development. Of course, it is not at all an issue when you are developing, e.g. a fetus, but it is a big problem when you are mature. If these genes are overexpressed, it is a sort of ‘over-reaction’ and the ultimate result is malignancy. It has been shown that the abnormal signaling of Hedgehog pathway can lead to basal cell carcinoma and also some childhood tumors. This article has a bit of molecular biology and chemistry, and should be really useful for biochemistry and molecular biology students.

A diagram explaining the Hedgehog Signalling Pathway. Taken from [2].

I would also like to provide a brief discussion about the Hedgehog pathway here.  At the start, the protein ‘Patched’ inhibit the activity of ‘Smoothened’, which is a 7-transmembrane spanning, GPCR like protein. After the Hedgehog protein is cleaved and covalently modified by the addition of a palmitoyl and a cholesterol group ( both are fatty groups), that becomes hydrophobic and so it can associate with the membrane and its diffusion ability  will be limited as a result. This is indeed important because it has be previously shown that a reasonable amount of Hedgehog protein has to be present to effect downstream signaling, and so the limited diffusion  will help to establish a concentration of the Hedgehog protein.  Now, before we understand what the Hedgehog protein is up to, let us divert ourselves for one further detail. In the cell there exists a Hedgehog signaling complex (HSC), which is a series of protein that is associated with the microtubule in the cell. Among those proteins is a transcription factor called Ci, and when Ci is cleaved, it moves into the nucleus and lead to a reduced transcription of relevant genes.  However, when Hedgehog protein is present, it binds to Patched, which no longer inhibits the Smoothened Protein. To state it another way, the Hedgehog protein ‘releases’ the Smoothened protein indirectly. Smoothened is then phosphorylated by Protein Kinase A and Casein Kinase 1. Phosphorylations also occur for the other proteins in HSC and they associate with the  phosphorylated Smoothened.  Eventually, the HSC complex is no longer associated with the microtubule, and Ci is not cleaved. Therefore,  the intact Ci cannot repress transcription as a result. That is why Smoothened is an oncoprotein – because it leads to an intact Ci, which is not able to put a brake on the transcription. The wheel goes on and then ‘abnormal’ proteins are over-produced as a result. Given that ‘Smoothened’ and ‘Patched’ are nemesis, it won’t be too wrong to say ‘Smooth the Patchy Hedgehog’!

If you are interested, you can explore more about this in any biochemistry textbooks - a reasonably great understanding has been developed about this fascinating pathway.

by Ed Law
28/4/2015

Reference:

1. Regulation of the oncoprotein Smoothened by small molecules
Hayley J Sharpe, Weiru Wang, Rami N Hannoush & Frederic J de Sauvage
Nature Chemical Biology, 2015, 11, 246-255. 
doi:10.1038/nchembio.1776

2. http://www.novusbio.com/hedgehogpathway.html